Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20■□□□□ 0.79
HIPK3Q9H422 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20■□□□□ 0.79
HIPK3Q9H422 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20■□□□□ 0.79
HIPK3Q9H422 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 RPS2P1-201ENST00000434010 821 ntBASIC19.99■□□□□ 0.79
HIPK3Q9H422 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 AL356488.2-201ENST00000602755 427 ntBASIC19.99■□□□□ 0.79
HIPK3Q9H422 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
HIPK3Q9H422 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HIPK3Q9H422 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 HLA-J-201ENST00000462773 1622 ntBASIC19.98■□□□□ 0.79
HIPK3Q9H422 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 SART3-203ENST00000546611 1184 ntBASIC19.98■□□□□ 0.79
HIPK3Q9H422 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 AP005117.1-201ENST00000584346 1413 ntBASIC19.98■□□□□ 0.79
HIPK3Q9H422 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.98■□□□□ 0.79
HIPK3Q9H422 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HIPK3Q9H422 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 UPF3AP3-201ENST00000420996 769 ntBASIC19.97■□□□□ 0.79
HIPK3Q9H422 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 AC092910.1-201ENST00000482027 1129 ntBASIC19.97■□□□□ 0.79
HIPK3Q9H422 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 AC011467.2-201ENST00000598425 242 ntBASIC19.97■□□□□ 0.79
HIPK3Q9H422 AL138831.2-201ENST00000606564 490 ntBASIC19.97■□□□□ 0.79
HIPK3Q9H422 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 AC009102.3-201ENST00000623118 1491 ntBASIC19.97■□□□□ 0.79
HIPK3Q9H422 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.97■□□□□ 0.79
HIPK3Q9H422 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HIPK3Q9H422 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.96■□□□□ 0.79
HIPK3Q9H422 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HIPK3Q9H422 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms