Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 LINC01126-201ENST00000623515 1646 ntBASIC18.97■□□□□ 0.63
RNF38Q9H0F5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 AP005901.3-202ENST00000581653 237 ntBASIC18.97■□□□□ 0.63
RNF38Q9H0F5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF38Q9H0F5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AC026396.1-201ENST00000419388 421 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 IGHV3-47-201ENST00000425060 335 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 KRT17P6-201ENST00000453795 1220 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AC104819.1-201ENST00000504587 486 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AC113404.2-201ENST00000507884 177 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AL691432.3-201ENST00000621860 400 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF38Q9H0F5 AL031598.1-201ENST00000561511 1773 ntBASIC18.96■□□□□ 0.63
RNF38Q9H0F5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 CROCCP3-202ENST00000420820 1947 ntBASIC18.95■□□□□ 0.62
RNF38Q9H0F5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF38Q9H0F5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms