Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM6SF1Q9BZW5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM6SF1Q9BZW5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TM6SF1Q9BZW5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM6SF1Q9BZW5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 AC024243.1-201ENST00000609234 778 ntBASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TM6SF1Q9BZW5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 GNAS-203ENST00000306120 1878 ntBASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 ECEL1P3-201ENST00000427961 737 ntBASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 MIR3917-201ENST00000580971 93 ntBASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM6SF1Q9BZW5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 LINC01568-207ENST00000641790 1380 ntBASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 AC093827.2-201ENST00000512654 315 ntBASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM6SF1Q9BZW5 AC134043.2-201ENST00000624206 2238 ntBASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 KRT18P55-202ENST00000578578 1546 ntBASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 DUTP2-201ENST00000519164 463 ntBASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM6SF1Q9BZW5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms