Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 KRT18P65-201ENST00000439811 1286 ntBASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 AC093503.3-201ENST00000624917 2352 ntBASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
CDK5RAP2Q96SN8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 AC106795.1-205ENST00000512851 1056 ntBASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 MINOS1P3-201ENST00000457048 203 ntBASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDK5RAP2Q96SN8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 AL773604.1-201ENST00000617417 272 ntBASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP2Q96SN8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 IGHV3-41-201ENST00000613121 348 ntBASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP2Q96SN8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms