Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.41■□□□□ 0.38
BBS4Q96RK4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BBS4Q96RK4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.41■□□□□ 0.38
BBS4Q96RK4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.41■□□□□ 0.38
BBS4Q96RK4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.41■□□□□ 0.38
BBS4Q96RK4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
BBS4Q96RK4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 KRT8P7-201ENST00000533003 1432 ntBASIC17.4■□□□□ 0.38
BBS4Q96RK4 HOXB1-202ENST00000577092 1414 ntBASIC17.4■□□□□ 0.38
BBS4Q96RK4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
BBS4Q96RK4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS4Q96RK4 AL354751.1-201ENST00000412768 1863 ntBASIC17.39■□□□□ 0.38
BBS4Q96RK4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BBS4Q96RK4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 ABALON-201ENST00000629058 1903 ntBASIC17.39■□□□□ 0.37
BBS4Q96RK4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 ECEL1P2-202ENST00000465689 757 ntBASIC17.39■□□□□ 0.37
BBS4Q96RK4 AL512604.3-201ENST00000569583 964 ntBASIC17.39■□□□□ 0.37
BBS4Q96RK4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 AC112497.1-201ENST00000624824 639 ntBASIC17.39■□□□□ 0.37
BBS4Q96RK4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BBS4Q96RK4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS4Q96RK4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BBS4Q96RK4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.38■□□□□ 0.37
BBS4Q96RK4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.38■□□□□ 0.37
BBS4Q96RK4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS4Q96RK4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.38■□□□□ 0.37
BBS4Q96RK4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
BBS4Q96RK4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms