Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 AC011840.4-201ENST00000578471 627 ntBASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNGAP1Q96PV0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 AL163051.1-201ENST00000569214 1512 ntBASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 NUS1P2-201ENST00000417358 873 ntBASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 POM121L3P-201ENST00000419331 1163 ntBASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 HLA-A-201ENST00000376802 1334 ntBASIC20.8■□□□□ 0.92
SYNGAP1Q96PV0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 MINOS1P3-201ENST00000457048 203 ntBASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 TNXA-203ENST00000507684 2038 ntBASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNGAP1Q96PV0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 TSPY12P-201ENST00000421279 868 ntBASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AC083906.6-201ENST00000641366 219 ntBASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.78■□□□□ 0.92
SYNGAP1Q96PV0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms