Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX3Q96PT4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 AL391807.1-203ENST00000604392 2365 ntBASIC14.28□□□□□ -0.12
DUX3Q96PT4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX3Q96PT4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX3Q96PT4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
DUX3Q96PT4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX3Q96PT4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
DUX3Q96PT4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
DUX3Q96PT4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX3Q96PT4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 AC104390.1-201ENST00000555663 520 ntBASIC14.27□□□□□ -0.13
DUX3Q96PT4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 AC092119.3-201ENST00000612618 583 ntBASIC14.27□□□□□ -0.13
DUX3Q96PT4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
DUX3Q96PT4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 Z98044.1-201ENST00000632503 1764 ntBASIC14.27□□□□□ -0.13
DUX3Q96PT4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DUX3Q96PT4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 HEIH-201ENST00000623091 1652 ntBASIC14.26□□□□□ -0.13
DUX3Q96PT4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC011498.5-201ENST00000592027 486 ntBASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC012313.10-201ENST00000623509 926 ntBASIC14.26□□□□□ -0.13
DUX3Q96PT4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AC087289.5-201ENST00000586076 3175 ntBASIC14.26□□□□□ -0.13
DUX3Q96PT4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DUX3Q96PT4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DUX3Q96PT4 AL162741.1-201ENST00000565563 1558 ntBASIC14.26□□□□□ -0.13
DUX3Q96PT4 MTMR9LP-203ENST00000426597 1545 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms