Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AL162741.1-201ENST00000565563 1558 ntBASIC18.89■□□□□ 0.61
RPRD1AQ96P16 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AC024563.2-201ENST00000603282 481 ntBASIC18.88■□□□□ 0.61
RPRD1AQ96P16 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AL138781.2-201ENST00000617896 1843 ntBASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AC073592.3-201ENST00000625118 1834 ntBASIC18.88■□□□□ 0.61
RPRD1AQ96P16 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPRD1AQ96P16 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 KRT18P48-201ENST00000434763 852 ntBASIC18.87■□□□□ 0.61
RPRD1AQ96P16 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 AC116407.4-201ENST00000623319 1061 ntBASIC18.87■□□□□ 0.61
RPRD1AQ96P16 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPRD1AQ96P16 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPRD1AQ96P16 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 AP003733.1-201ENST00000491725 852 ntBASIC18.85■□□□□ 0.61
RPRD1AQ96P16 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.85■□□□□ 0.61
RPRD1AQ96P16 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms