Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
FGD4Q96M96 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FGD4Q96M96 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FGD4Q96M96 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FGD4Q96M96 POM121L3P-201ENST00000419331 1163 ntBASIC20.73■□□□□ 0.91
FGD4Q96M96 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.73■□□□□ 0.91
FGD4Q96M96 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FGD4Q96M96 MINOS1P3-201ENST00000457048 203 ntBASIC20.73■□□□□ 0.91
FGD4Q96M96 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.73■□□□□ 0.91
FGD4Q96M96 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.73■□□□□ 0.91
FGD4Q96M96 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.73■□□□□ 0.91
FGD4Q96M96 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.73■□□□□ 0.91
FGD4Q96M96 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.73■□□□□ 0.91
FGD4Q96M96 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.73■□□□□ 0.91
FGD4Q96M96 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FGD4Q96M96 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FGD4Q96M96 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.73■□□□□ 0.91
FGD4Q96M96 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
FGD4Q96M96 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.73■□□□□ 0.91
FGD4Q96M96 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
FGD4Q96M96 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FGD4Q96M96 AC079776.4-201ENST00000511039 504 ntBASIC20.72■□□□□ 0.91
FGD4Q96M96 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.72■□□□□ 0.91
FGD4Q96M96 MIR5100-201ENST00000579544 119 ntBASIC20.72■□□□□ 0.91
FGD4Q96M96 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.72■□□□□ 0.91
FGD4Q96M96 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FGD4Q96M96 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FGD4Q96M96 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 AL499627.1-201ENST00000569373 2188 ntBASIC20.72■□□□□ 0.91
FGD4Q96M96 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.72■□□□□ 0.91
FGD4Q96M96 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FGD4Q96M96 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.71■□□□□ 0.91
FGD4Q96M96 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.71■□□□□ 0.91
FGD4Q96M96 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.71■□□□□ 0.91
FGD4Q96M96 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 AC114341.1-201ENST00000618070 349 ntBASIC20.71■□□□□ 0.91
FGD4Q96M96 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.71■□□□□ 0.91
FGD4Q96M96 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.71■□□□□ 0.91
FGD4Q96M96 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FGD4Q96M96 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FGD4Q96M96 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FGD4Q96M96 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.7■□□□□ 0.9
FGD4Q96M96 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 AC068472.1-201ENST00000474589 881 ntBASIC20.7■□□□□ 0.9
FGD4Q96M96 AC096582.2-201ENST00000510860 516 ntBASIC20.7■□□□□ 0.9
FGD4Q96M96 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 MYLKP1-201ENST00000509077 1580 ntBASIC20.7■□□□□ 0.9
FGD4Q96M96 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.7■□□□□ 0.9
FGD4Q96M96 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.7■□□□□ 0.9
FGD4Q96M96 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FGD4Q96M96 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.7■□□□□ 0.9
FGD4Q96M96 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FGD4Q96M96 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FGD4Q96M96 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FGD4Q96M96 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms