Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.12■□□□□ 0.49
SPDL1Q96EA4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPDL1Q96EA4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.12■□□□□ 0.49
SPDL1Q96EA4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC011676.5-201ENST00000624864 2660 ntBASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC060766.5-201ENST00000590539 871 ntBASIC18.11■□□□□ 0.49
SPDL1Q96EA4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 AL645608.8-201ENST00000606034 2086 ntBASIC18.11■□□□□ 0.49
SPDL1Q96EA4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 NKILA-202ENST00000614771 2598 ntBASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SPDL1Q96EA4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 AC134043.2-201ENST00000624206 2238 ntBASIC18.1■□□□□ 0.49
SPDL1Q96EA4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 AC097658.1-201ENST00000475555 843 ntBASIC18.1■□□□□ 0.49
SPDL1Q96EA4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.1■□□□□ 0.49
SPDL1Q96EA4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 MYC-209ENST00000641252 345 ntBASIC18.1■□□□□ 0.49
SPDL1Q96EA4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPDL1Q96EA4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.09■□□□□ 0.49
SPDL1Q96EA4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.09■□□□□ 0.49
SPDL1Q96EA4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms