Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 AC141586.3-201ENST00000562166 1838 ntBASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 KRT18P2-201ENST00000447938 1258 ntBASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 LINC01006-201ENST00000333319 2292 ntBASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 PKD1P6-201ENST00000343738 4769 ntBASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 AC009102.3-201ENST00000623118 1491 ntBASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM43Q96BQ3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 LAGE3P1-201ENST00000425356 484 ntBASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 AC005829.1-201ENST00000570002 483 ntBASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM43Q96BQ3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM43Q96BQ3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 AL024508.2-201ENST00000607749 1894 ntBASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 MCCD1P2-201ENST00000423228 335 ntBASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 YBX1P5-201ENST00000509441 847 ntBASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 AP000867.4-201ENST00000641616 219 ntBASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms