Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 RNF152P1-201ENST00000397754 604 ntBASIC19.72■□□□□ 0.75
SEMA4DQ92854 AK4P3-201ENST00000418260 669 ntBASIC19.72■□□□□ 0.75
SEMA4DQ92854 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 AC009065.1-201ENST00000564055 1225 ntBASIC19.72■□□□□ 0.75
SEMA4DQ92854 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.72■□□□□ 0.75
SEMA4DQ92854 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 REXO1L9P-201ENST00000604264 2108 ntBASIC19.72■□□□□ 0.75
SEMA4DQ92854 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 AL096828.2-201ENST00000567259 1965 ntBASIC19.72■□□□□ 0.75
SEMA4DQ92854 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA4DQ92854 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 PVRIG2P-201ENST00000435460 978 ntBASIC19.71■□□□□ 0.75
SEMA4DQ92854 AC092597.1-201ENST00000487352 616 ntBASIC19.71■□□□□ 0.75
SEMA4DQ92854 KRT18P21-201ENST00000515767 1272 ntBASIC19.71■□□□□ 0.75
SEMA4DQ92854 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA4DQ92854 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA4DQ92854 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 STARP1-201ENST00000397973 869 ntBASIC19.7■□□□□ 0.74
SEMA4DQ92854 TMPOP1-202ENST00000424642 1267 ntBASIC19.7■□□□□ 0.74
SEMA4DQ92854 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA4DQ92854 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA4DQ92854 NOC2LP1-202ENST00000452600 2235 ntBASIC19.7■□□□□ 0.74
SEMA4DQ92854 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms