Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 CD177P1-201ENST00000606252 935 ntBASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RTN4IP1Q8WWV3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 AC004951.3-201ENST00000418645 1148 ntBASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 AC233702.5-201ENST00000584107 538 ntBASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTN4IP1Q8WWV3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 SLC25A6P5-201ENST00000435663 894 ntBASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 AC068587.9-201ENST00000641814 219 ntBASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN4IP1Q8WWV3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.46■□□□□ 0.06
RTN4IP1Q8WWV3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AC112777.1-201ENST00000540175 1423 ntBASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AC091390.4-202ENST00000476426 537 ntBASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AC011298.2-201ENST00000617989 482 ntBASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AL049637.2-201ENST00000641778 930 ntBASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms