Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 RNA5SP415-201ENST00000517246 115 ntBASIC22.26■■□□□ 1.15
SNED1Q8TER0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 AL355385.1-201ENST00000606123 409 ntBASIC22.26■■□□□ 1.15
SNED1Q8TER0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNED1Q8TER0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 MTCL1P1-201ENST00000446207 792 ntBASIC22.25■■□□□ 1.15
SNED1Q8TER0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 AL139288.1-201ENST00000623748 933 ntBASIC22.25■■□□□ 1.15
SNED1Q8TER0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNED1Q8TER0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNED1Q8TER0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNED1Q8TER0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNED1Q8TER0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SNED1Q8TER0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SNED1Q8TER0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNED1Q8TER0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 RPS2P28-201ENST00000314255 741 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 AC092910.1-201ENST00000482027 1129 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 OR7E14P-202ENST00000530490 1290 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 AC008687.5-201ENST00000593746 558 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 HLA-J-201ENST00000462773 1622 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 AC007952.6-201ENST00000573168 2673 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 AC003957.1-201ENST00000625108 2673 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 AL032819.2-201ENST00000624543 2162 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNED1Q8TER0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.23■■□□□ 1.15
SNED1Q8TER0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.23■■□□□ 1.15
SNED1Q8TER0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNED1Q8TER0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNED1Q8TER0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNED1Q8TER0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNED1Q8TER0 AL356309.3-201ENST00000624132 1934 ntBASIC22.22■■□□□ 1.15
SNED1Q8TER0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.22■■□□□ 1.15
SNED1Q8TER0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNED1Q8TER0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.21■■□□□ 1.15
SNED1Q8TER0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms