Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TTC13Q8NBP0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC13Q8NBP0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC13Q8NBP0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19■□□□□ 0.63
TTC13Q8NBP0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19■□□□□ 0.63
TTC13Q8NBP0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19■□□□□ 0.63
TTC13Q8NBP0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC13Q8NBP0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC13Q8NBP0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TTC13Q8NBP0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TTC13Q8NBP0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC13Q8NBP0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 AP003041.3-201ENST00000527151 707 ntBASIC18.99■□□□□ 0.63
TTC13Q8NBP0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SDHAP2-201ENST00000455183 2001 ntBASIC18.99■□□□□ 0.63
TTC13Q8NBP0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.99■□□□□ 0.63
TTC13Q8NBP0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 AL096828.2-201ENST00000567259 1965 ntBASIC18.99■□□□□ 0.63
TTC13Q8NBP0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC13Q8NBP0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 KRT18P23-201ENST00000435622 1283 ntBASIC18.98■□□□□ 0.63
TTC13Q8NBP0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 RBM17P1-201ENST00000453646 1190 ntBASIC18.98■□□□□ 0.63
TTC13Q8NBP0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 MIR4785-201ENST00000585005 73 ntBASIC18.98■□□□□ 0.63
TTC13Q8NBP0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 PHGDH-209ENST00000641074 1780 ntBASIC18.98■□□□□ 0.63
TTC13Q8NBP0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC13Q8NBP0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 OR6D1P-202ENST00000641007 5290 ntBASIC18.97■□□□□ 0.63
TTC13Q8NBP0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 GNAS-203ENST00000306120 1878 ntBASIC18.97■□□□□ 0.63
TTC13Q8NBP0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 BX088651.1-201ENST00000540551 451 ntBASIC18.97■□□□□ 0.63
TTC13Q8NBP0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC13Q8NBP0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC13Q8NBP0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms