Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 NIFKP9-201ENST00000419265 221 ntBASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 NUDT16P1-203ENST00000513809 620 ntBASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 AC087388.1-201ENST00000571370 1112 ntBASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 AP000525.1-201ENST00000608286 694 ntBASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.24■□□□□ 0.51
EFCAB3Q8N7B9 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 AC008764.6-201ENST00000595909 2069 ntBASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCAB3Q8N7B9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 AL445675.2-201ENST00000620291 557 ntBASIC18.22■□□□□ 0.51
EFCAB3Q8N7B9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms