Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 AC006011.2-201ENST00000621313 1158 ntBASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 NFIC-211ENST00000641145 8399 ntBASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf42Q8N5U0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 AL499627.1-201ENST00000569373 2188 ntBASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 ANO7L1-203ENST00000602586 1720 ntBASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 KRT18P21-201ENST00000515767 1272 ntBASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 AC139887.4-201ENST00000607877 719 ntBASIC15.27■□□□□ 0.04
C11orf42Q8N5U0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf42Q8N5U0 KRT8P7-201ENST00000533003 1432 ntBASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 COX11P1-201ENST00000489116 835 ntBASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 AC011558.1-201ENST00000623459 338 ntBASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms