Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 CLEC4GP1-201ENST00000596555 870 ntBASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 SDHAP2-201ENST00000455183 2001 ntBASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SCN4BQ8IWT1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 IGHV3-41-201ENST00000613121 348 ntBASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 AC012313.10-201ENST00000623509 926 ntBASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN4BQ8IWT1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 MIR3180-1-201ENST00000580374 94 ntBASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 MIR3180-3-201ENST00000584616 94 ntBASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN4BQ8IWT1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SCN4BQ8IWT1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms