Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 AC010980.2-201ENST00000587099 1412 ntBASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 AC106886.4-201ENST00000623557 2502 ntBASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 KRT17P1-201ENST00000399211 1546 ntBASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LYSMD2Q8IV50 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 AC069236.1-201ENST00000604339 616 ntBASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 BID-214ENST00000617586 542 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LYSMD2Q8IV50 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 AC008556.1-201ENST00000610908 2040 ntBASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 AC068418.2-201ENST00000577309 3703 ntBASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms