Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 AC138028.4-201ENST00000564984 1845 ntBASIC16.35■□□□□ 0.21
LRRC28Q86X40 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 AL355355.2-201ENST00000442321 338 ntBASIC16.34■□□□□ 0.21
LRRC28Q86X40 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC28Q86X40 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC28Q86X40 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC28Q86X40 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LRRC28Q86X40 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC28Q86X40 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 AC026471.5-201ENST00000615068 467 ntBASIC16.33■□□□□ 0.2
LRRC28Q86X40 CR392000.1-201ENST00000624770 1228 ntBASIC16.33■□□□□ 0.2
LRRC28Q86X40 PCDHA12-202ENST00000613593 2588 ntBASIC16.33■□□□□ 0.2
LRRC28Q86X40 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 KRT16P1-201ENST00000399124 1418 ntBASIC16.33■□□□□ 0.2
LRRC28Q86X40 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC28Q86X40 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC28Q86X40 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC28Q86X40 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC28Q86X40 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms