Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 AC011558.1-201ENST00000623459 338 ntBASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
COLCA1Q6ZS62 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 RASA4DP-201ENST00000460726 1199 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 YBX1P2-201ENST00000489612 999 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC008687.5-201ENST00000593746 558 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC139887.4-201ENST00000607877 719 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 FLJ13224-201ENST00000313737 1514 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 AC138028.4-201ENST00000564984 1845 ntBASIC15.78■□□□□ 0.12
COLCA1Q6ZS62 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 STARP1-201ENST00000397973 869 ntBASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 AC117947.1-201ENST00000427448 529 ntBASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
COLCA1Q6ZS62 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 REXO1L9P-201ENST00000604264 2108 ntBASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COLCA1Q6ZS62 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.76■□□□□ 0.11
COLCA1Q6ZS62 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms