Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCRAQ6ISU1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.84■□□□□ 0.61
PTCRAQ6ISU1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCRAQ6ISU1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCRAQ6ISU1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTCRAQ6ISU1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.83■□□□□ 0.61
PTCRAQ6ISU1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCRAQ6ISU1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.83■□□□□ 0.61
PTCRAQ6ISU1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCRAQ6ISU1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 AC099778.1-201ENST00000568593 1911 ntBASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCRAQ6ISU1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 AC092865.6-201ENST00000642101 219 ntBASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
PTCRAQ6ISU1 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 PAWRP1-201ENST00000451083 565 ntBASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 AC006557.2-201ENST00000592985 1240 ntBASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 AL096865.1-201ENST00000606796 927 ntBASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCRAQ6ISU1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 AC092474.2-201ENST00000424288 719 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 KRT18P27-201ENST00000427733 1299 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 BCRP1-201ENST00000444246 691 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 CEND1P1-201ENST00000451006 455 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 BX005266.1-201ENST00000473402 457 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 AL078644.1-201ENST00000609881 752 ntBASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCRAQ6ISU1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms