Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RTL6Q6ICC9 AC034236.2-201ENST00000606662 1610 ntBASIC16.56■□□□□ 0.24
RTL6Q6ICC9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 TSPY22P-201ENST00000427496 604 ntBASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AP002414.4-201ENST00000589764 1148 ntBASIC16.55■□□□□ 0.24
RTL6Q6ICC9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AC068587.9-201ENST00000641814 219 ntBASIC16.55■□□□□ 0.24
RTL6Q6ICC9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
RTL6Q6ICC9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 AC020763.4-201ENST00000623414 4170 ntBASIC16.54■□□□□ 0.24
RTL6Q6ICC9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.54■□□□□ 0.24
RTL6Q6ICC9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTL6Q6ICC9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTL6Q6ICC9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms