Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MTDHP1-201ENST00000605323 784 ntBASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC133041.1-202ENST00000642053 222 ntBASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AL109659.2-201ENST00000606809 1674 ntBASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00242Q5T6M2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PHGDH-209ENST00000641074 1780 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AC108860.2-201ENST00000562760 2183 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PCDHA12-202ENST00000613593 2588 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AP000593.1-201ENST00000393668 712 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 KRT16P5-201ENST00000455284 522 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 UNC93B5-201ENST00000530315 699 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AC099398.1-201ENST00000567919 2776 ntBASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00242Q5T6M2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 MIR935-201ENST00000401179 91 ntBASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AC004980.1-204ENST00000429707 299 ntBASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AC069152.1-201ENST00000438030 544 ntBASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 AC091390.4-202ENST00000476426 537 ntBASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms