Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 LINC01711-201ENST00000598340 967 ntBASIC19.38■□□□□ 0.69
VARS2Q5ST30 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
VARS2Q5ST30 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARS2Q5ST30 AC005082.1-201ENST00000413042 2259 ntBASIC19.37■□□□□ 0.69
VARS2Q5ST30 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 AL353801.3-201ENST00000609898 542 ntBASIC19.37■□□□□ 0.69
VARS2Q5ST30 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.37■□□□□ 0.69
VARS2Q5ST30 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARS2Q5ST30 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 TSPY12P-201ENST00000421279 868 ntBASIC19.36■□□□□ 0.69
VARS2Q5ST30 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.36■□□□□ 0.69
VARS2Q5ST30 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARS2Q5ST30 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
VARS2Q5ST30 LINC01126-201ENST00000623515 1646 ntBASIC19.36■□□□□ 0.69
VARS2Q5ST30 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.35■□□□□ 0.69
VARS2Q5ST30 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms