Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 AC007663.1-201ENST00000438948 1240 ntBASIC17.09■□□□□ 0.33
SYPL1Q16563 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.09■□□□□ 0.33
SYPL1Q16563 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.09■□□□□ 0.33
SYPL1Q16563 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 HOXB1-202ENST00000577092 1414 ntBASIC17.09■□□□□ 0.33
SYPL1Q16563 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.09■□□□□ 0.33
SYPL1Q16563 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.09■□□□□ 0.33
SYPL1Q16563 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
SYPL1Q16563 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.09■□□□□ 0.33
SYPL1Q16563 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 AC090340.1-201ENST00000620778 4980 ntBASIC17.09■□□□□ 0.33
SYPL1Q16563 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SYPL1Q16563 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYPL1Q16563 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYPL1Q16563 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.33
SYPL1Q16563 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYPL1Q16563 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYPL1Q16563 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYPL1Q16563 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.08■□□□□ 0.33
SYPL1Q16563 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.08■□□□□ 0.32
SYPL1Q16563 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
SYPL1Q16563 AC009102.3-201ENST00000623118 1491 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 KRT17P2-201ENST00000300992 1314 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SYPL1Q16563 MIR149-201ENST00000384879 89 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
SYPL1Q16563 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.08■□□□□ 0.32
SYPL1Q16563 TSPY15P-201ENST00000457163 923 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 BX088651.1-201ENST00000540551 451 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.08■□□□□ 0.32
SYPL1Q16563 WWOX-216ENST00000569818 525 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SYPL1Q16563 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.08■□□□□ 0.32
SYPL1Q16563 AC116562.4-202ENST00000641738 218 ntBASIC17.08■□□□□ 0.32
SYPL1Q16563 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SYPL1Q16563 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SYPL1Q16563 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYPL1Q16563 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SYPL1Q16563 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 INGX-201ENST00000359239 846 ntBASIC17.07■□□□□ 0.32
SYPL1Q16563 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.07■□□□□ 0.32
SYPL1Q16563 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.07■□□□□ 0.32
SYPL1Q16563 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SYPL1Q16563 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.07■□□□□ 0.32
SYPL1Q16563 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYPL1Q16563 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
SYPL1Q16563 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.06■□□□□ 0.32
SYPL1Q16563 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.06■□□□□ 0.32
SYPL1Q16563 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.06■□□□□ 0.32
SYPL1Q16563 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms