Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CKS1BP61024 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS1BP61024 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS1BP61024 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS1BP61024 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CKS1BP61024 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS1BP61024 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS1BP61024 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS1BP61024 TFP1-202ENST00000475455 1573 ntBASIC12.86□□□□□ -0.35
CKS1BP61024 IRX1P1-201ENST00000438849 1838 ntBASIC12.85□□□□□ -0.35
CKS1BP61024 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 KRT17P1-201ENST00000399211 1546 ntBASIC12.85□□□□□ -0.35
CKS1BP61024 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.85□□□□□ -0.35
CKS1BP61024 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 AL512625.2-201ENST00000417533 625 ntBASIC12.85□□□□□ -0.35
CKS1BP61024 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.85□□□□□ -0.35
CKS1BP61024 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS1BP61024 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS1BP61024 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS1BP61024 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CKS1BP61024 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CKS1BP61024 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
CKS1BP61024 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CKS1BP61024 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CKS1BP61024 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CKS1BP61024 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
CKS1BP61024 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.84□□□□□ -0.35
CKS1BP61024 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 MIR6821-201ENST00000617625 74 ntBASIC12.84□□□□□ -0.35
CKS1BP61024 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 Z98044.1-201ENST00000632503 1764 ntBASIC12.84□□□□□ -0.35
CKS1BP61024 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS1BP61024 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS1BP61024 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS1BP61024 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms