Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP4BP1P59074 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 TSSC2-201ENST00000450217 709 ntBASIC20.93■□□□□ 0.94
CHMP4BP1P59074 SEC1P-202ENST00000473944 940 ntBASIC20.93■□□□□ 0.94
CHMP4BP1P59074 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 NPAP1P7-201ENST00000613027 823 ntBASIC20.93■□□□□ 0.94
CHMP4BP1P59074 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 RCC2P3-201ENST00000418112 1537 ntBASIC20.93■□□□□ 0.94
CHMP4BP1P59074 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 AC009113.1-201ENST00000570267 2443 ntBASIC20.93■□□□□ 0.94
CHMP4BP1P59074 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP4BP1P59074 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 AL121672.3-201ENST00000608644 468 ntBASIC20.92■□□□□ 0.94
CHMP4BP1P59074 AC079602.3-201ENST00000623931 403 ntBASIC20.92■□□□□ 0.94
CHMP4BP1P59074 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP4BP1P59074 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms