Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLDN12P56749 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 UNC93B4-201ENST00000505679 747 ntBASIC15.98■□□□□ 0.15
CLDN12P56749 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.98■□□□□ 0.15
CLDN12P56749 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.98■□□□□ 0.15
CLDN12P56749 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN12P56749 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN12P56749 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN12P56749 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 RCC2P3-201ENST00000418112 1537 ntBASIC15.98■□□□□ 0.15
CLDN12P56749 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLDN12P56749 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN12P56749 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLDN12P56749 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN12P56749 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN12P56749 POM121L13P-201ENST00000422362 380 ntBASIC15.97■□□□□ 0.15
CLDN12P56749 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 AL138781.1-201ENST00000566567 1274 ntBASIC15.97■□□□□ 0.15
CLDN12P56749 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN12P56749 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN12P56749 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN12P56749 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN12P56749 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN12P56749 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 AC084018.2-201ENST00000613093 2607 ntBASIC15.96■□□□□ 0.15
CLDN12P56749 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN12P56749 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN12P56749 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms