Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR564-202ENST00000385049 94 ntBASIC17.81■□□□□ 0.44
PDX1P52945 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.81■□□□□ 0.44
PDX1P52945 AC079781.3-201ENST00000449110 356 ntBASIC17.81■□□□□ 0.44
PDX1P52945 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 KRT8P32-201ENST00000512863 1461 ntBASIC17.81■□□□□ 0.44
PDX1P52945 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDX1P52945 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 IRX1P1-201ENST00000438849 1838 ntBASIC17.8■□□□□ 0.44
PDX1P52945 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 KRT18P31-201ENST00000506277 1292 ntBASIC17.8■□□□□ 0.44
PDX1P52945 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDX1P52945 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDX1P52945 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.8■□□□□ 0.44
PDX1P52945 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.79■□□□□ 0.44
PDX1P52945 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 AP003733.1-201ENST00000491725 852 ntBASIC17.79■□□□□ 0.44
PDX1P52945 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 AC091304.2-201ENST00000564639 760 ntBASIC17.79■□□□□ 0.44
PDX1P52945 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDX1P52945 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.79■□□□□ 0.44
PDX1P52945 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.79■□□□□ 0.44
PDX1P52945 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.79■□□□□ 0.44
PDX1P52945 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.79■□□□□ 0.44
PDX1P52945 AL121772.3-201ENST00000610840 674 ntBASIC17.79■□□□□ 0.44
PDX1P52945 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.79■□□□□ 0.44
PDX1P52945 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDX1P52945 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.79■□□□□ 0.44
PDX1P52945 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.79■□□□□ 0.44
PDX1P52945 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PDX1P52945 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDX1P52945 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PDX1P52945 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDX1P52945 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.78■□□□□ 0.44
PDX1P52945 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.78■□□□□ 0.44
PDX1P52945 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.78■□□□□ 0.44
PDX1P52945 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PDX1P52945 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDX1P52945 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms