Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.86■□□□□ 0.93
TM4SF4P48230 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF4P48230 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 AC136632.2-201ENST00000512891 861 ntBASIC20.86■□□□□ 0.93
TM4SF4P48230 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.86■□□□□ 0.93
TM4SF4P48230 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF4P48230 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF4P48230 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF4P48230 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TM4SF4P48230 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF4P48230 ELL2P1-201ENST00000413990 1906 ntBASIC20.85■□□□□ 0.93
TM4SF4P48230 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TM4SF4P48230 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.85■□□□□ 0.93
TM4SF4P48230 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TM4SF4P48230 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF4P48230 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.85■□□□□ 0.93
TM4SF4P48230 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.85■□□□□ 0.93
TM4SF4P48230 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 AC073592.4-201ENST00000623827 446 ntBASIC20.85■□□□□ 0.93
TM4SF4P48230 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF4P48230 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF4P48230 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.85■□□□□ 0.93
TM4SF4P48230 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TM4SF4P48230 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF4P48230 KRT18P65-201ENST00000439811 1286 ntBASIC20.84■□□□□ 0.93
TM4SF4P48230 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TM4SF4P48230 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF4P48230 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF4P48230 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.84■□□□□ 0.93
TM4SF4P48230 AL096865.1-201ENST00000606796 927 ntBASIC20.84■□□□□ 0.93
TM4SF4P48230 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
TM4SF4P48230 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF4P48230 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF4P48230 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TM4SF4P48230 LINC00602-201ENST00000629776 2065 ntBASIC20.84■□□□□ 0.93
TM4SF4P48230 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TM4SF4P48230 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF4P48230 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF4P48230 AC141586.3-201ENST00000562166 1838 ntBASIC20.83■□□□□ 0.93
TM4SF4P48230 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF4P48230 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF4P48230 CRYGEP-201ENST00000412192 528 ntBASIC20.83■□□□□ 0.93
TM4SF4P48230 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.83■□□□□ 0.93
TM4SF4P48230 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.83■□□□□ 0.93
TM4SF4P48230 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.83■□□□□ 0.93
TM4SF4P48230 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TM4SF4P48230 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TM4SF4P48230 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.83■□□□□ 0.93
TM4SF4P48230 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
TM4SF4P48230 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.83■□□□□ 0.93
TM4SF4P48230 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF4P48230 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.83■□□□□ 0.93
TM4SF4P48230 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF4P48230 PMPCAP1-201ENST00000508114 1576 ntBASIC20.83■□□□□ 0.92
TM4SF4P48230 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF4P48230 SDHAP2-201ENST00000455183 2001 ntBASIC20.83■□□□□ 0.92
TM4SF4P48230 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF4P48230 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF4P48230 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.83■□□□□ 0.92
TM4SF4P48230 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF4P48230 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF4P48230 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF4P48230 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.82■□□□□ 0.92
TM4SF4P48230 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF4P48230 HLA-J-203ENST00000494367 1087 ntBASIC20.82■□□□□ 0.92
TM4SF4P48230 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.82■□□□□ 0.92
TM4SF4P48230 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF4P48230 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF4P48230 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.82■□□□□ 0.92
TM4SF4P48230 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TM4SF4P48230 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF4P48230 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF4P48230 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF4P48230 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.82■□□□□ 0.92
TM4SF4P48230 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms