Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RABIFP47224 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RABIFP47224 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.96■□□□□ 0.46
RABIFP47224 AL499627.1-201ENST00000569373 2188 ntBASIC17.96■□□□□ 0.46
RABIFP47224 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
RABIFP47224 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RABIFP47224 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.95■□□□□ 0.46
RABIFP47224 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 AC091607.1-201ENST00000490318 1060 ntBASIC17.95■□□□□ 0.46
RABIFP47224 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RABIFP47224 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RABIFP47224 KRT8P10-201ENST00000450021 1447 ntBASIC17.95■□□□□ 0.46
RABIFP47224 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.95■□□□□ 0.46
RABIFP47224 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RABIFP47224 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RABIFP47224 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RABIFP47224 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.95■□□□□ 0.46
RABIFP47224 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RABIFP47224 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.94■□□□□ 0.46
RABIFP47224 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.94■□□□□ 0.46
RABIFP47224 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RABIFP47224 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RABIFP47224 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RABIFP47224 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.94■□□□□ 0.46
RABIFP47224 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.94■□□□□ 0.46
RABIFP47224 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RABIFP47224 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RABIFP47224 NUS1P2-201ENST00000417358 873 ntBASIC17.94■□□□□ 0.46
RABIFP47224 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.94■□□□□ 0.46
RABIFP47224 FDX1P1-201ENST00000449115 551 ntBASIC17.94■□□□□ 0.46
RABIFP47224 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.94■□□□□ 0.46
RABIFP47224 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.94■□□□□ 0.46
RABIFP47224 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.94■□□□□ 0.46
RABIFP47224 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.94■□□□□ 0.46
RABIFP47224 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.94■□□□□ 0.46
RABIFP47224 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
RABIFP47224 AC099343.3-201ENST00000605834 2503 ntBASIC17.94■□□□□ 0.46
RABIFP47224 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RABIFP47224 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.93■□□□□ 0.46
RABIFP47224 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.93■□□□□ 0.46
RABIFP47224 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
RABIFP47224 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.93■□□□□ 0.46
RABIFP47224 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RABIFP47224 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 ANO7L1-203ENST00000602586 1720 ntBASIC17.92■□□□□ 0.46
RABIFP47224 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.92■□□□□ 0.46
RABIFP47224 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RABIFP47224 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.92■□□□□ 0.46
RABIFP47224 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RABIFP47224 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RABIFP47224 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RABIFP47224 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RABIFP47224 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms