Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX5P45973 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX5P45973 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX5P45973 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX5P45973 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX5P45973 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX5P45973 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX5P45973 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.81■□□□□ 0.12
CBX5P45973 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX5P45973 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.81■□□□□ 0.12
CBX5P45973 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX5P45973 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CBX5P45973 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CBX5P45973 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX5P45973 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX5P45973 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX5P45973 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.8■□□□□ 0.12
CBX5P45973 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CBX5P45973 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.8■□□□□ 0.12
CBX5P45973 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CBX5P45973 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.8■□□□□ 0.12
CBX5P45973 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.8■□□□□ 0.12
CBX5P45973 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.8■□□□□ 0.12
CBX5P45973 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX5P45973 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX5P45973 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX5P45973 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX5P45973 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CBX5P45973 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms