Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC27.39■■□□□ 1.98
KDM5CP41229 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.39■■□□□ 1.98
KDM5CP41229 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.39■■□□□ 1.98
KDM5CP41229 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC27.39■■□□□ 1.98
KDM5CP41229 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KDM5CP41229 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC27.39■■□□□ 1.97
KDM5CP41229 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC27.39■■□□□ 1.97
KDM5CP41229 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC27.39■■□□□ 1.97
KDM5CP41229 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.39■■□□□ 1.97
KDM5CP41229 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.39■■□□□ 1.97
KDM5CP41229 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KDM5CP41229 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.39■■□□□ 1.97
KDM5CP41229 COX5A-204ENST00000567270 579 ntTSL 3 BASIC27.39■■□□□ 1.97
KDM5CP41229 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.39■■□□□ 1.97
KDM5CP41229 MTDHP4-201ENST00000600287 670 ntBASIC27.39■■□□□ 1.97
KDM5CP41229 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC27.39■■□□□ 1.97
KDM5CP41229 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
KDM5CP41229 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC27.38■■□□□ 1.97
KDM5CP41229 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.38■■□□□ 1.97
KDM5CP41229 MTCL1P1-201ENST00000446207 792 ntBASIC27.38■■□□□ 1.97
KDM5CP41229 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
KDM5CP41229 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.38■■□□□ 1.97
KDM5CP41229 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.38■■□□□ 1.97
KDM5CP41229 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.38■■□□□ 1.97
KDM5CP41229 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
KDM5CP41229 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC27.37■■□□□ 1.97
KDM5CP41229 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
KDM5CP41229 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM5CP41229 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.37■■□□□ 1.97
KDM5CP41229 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM5CP41229 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.37■■□□□ 1.97
KDM5CP41229 ALG1L5P-201ENST00000482043 771 ntBASIC27.37■■□□□ 1.97
KDM5CP41229 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM5CP41229 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM5CP41229 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
KDM5CP41229 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM5CP41229 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM5CP41229 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 ETFA-208ENST00000559602 792 ntTSL 3 BASIC27.36■■□□□ 1.97
KDM5CP41229 AC105339.3-201ENST00000560043 636 ntBASIC27.36■■□□□ 1.97
KDM5CP41229 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM5CP41229 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM5CP41229 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KDM5CP41229 FUOM-202ENST00000368551 628 ntTSL 3 BASIC27.35■■□□□ 1.97
KDM5CP41229 YBX1P5-201ENST00000509441 847 ntBASIC27.35■■□□□ 1.97
KDM5CP41229 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM5CP41229 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.35■■□□□ 1.97
KDM5CP41229 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.35■■□□□ 1.97
KDM5CP41229 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
KDM5CP41229 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.35■■□□□ 1.97
KDM5CP41229 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC27.35■■□□□ 1.97
KDM5CP41229 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
KDM5CP41229 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM5CP41229 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
KDM5CP41229 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM5CP41229 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KDM5CP41229 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
KDM5CP41229 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM5CP41229 RPS8P6-201ENST00000426177 609 ntBASIC27.35■■□□□ 1.97
KDM5CP41229 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.35■■□□□ 1.97
KDM5CP41229 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.35■■□□□ 1.97
KDM5CP41229 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.35■■□□□ 1.97
KDM5CP41229 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM5CP41229 PCDHAC2-203ENST00000615316 3011 ntBASIC27.34■■□□□ 1.97
KDM5CP41229 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC27.34■■□□□ 1.97
KDM5CP41229 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
KDM5CP41229 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM5CP41229 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.34■■□□□ 1.97
KDM5CP41229 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
KDM5CP41229 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.34■■□□□ 1.97
KDM5CP41229 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
KDM5CP41229 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
KDM5CP41229 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM5CP41229 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM5CP41229 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.33■■□□□ 1.97
KDM5CP41229 RFPL4AP1-201ENST00000530883 850 ntBASIC27.33■■□□□ 1.97
KDM5CP41229 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.33■■□□□ 1.97
KDM5CP41229 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.33■■□□□ 1.97
KDM5CP41229 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms