Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.99■□□□□ 0.79
USP8P40818 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
USP8P40818 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.99■□□□□ 0.79
USP8P40818 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
USP8P40818 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.99■□□□□ 0.79
USP8P40818 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.99■□□□□ 0.79
USP8P40818 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.99■□□□□ 0.79
USP8P40818 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 AC018470.1-201ENST00000624790 3129 ntBASIC19.99■□□□□ 0.79
USP8P40818 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP8P40818 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.99■□□□□ 0.79
USP8P40818 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP8P40818 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.98■□□□□ 0.79
USP8P40818 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP8P40818 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USP8P40818 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.98■□□□□ 0.79
USP8P40818 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.98■□□□□ 0.79
USP8P40818 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 MYC-208ENST00000641036 567 ntBASIC19.98■□□□□ 0.79
USP8P40818 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP8P40818 AC112777.1-201ENST00000540175 1423 ntBASIC19.98■□□□□ 0.79
USP8P40818 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
USP8P40818 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP8P40818 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.97■□□□□ 0.79
USP8P40818 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP8P40818 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.97■□□□□ 0.79
USP8P40818 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 AP003041.3-201ENST00000527151 707 ntBASIC19.97■□□□□ 0.79
USP8P40818 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 MIR4674-201ENST00000582457 87 ntBASIC19.97■□□□□ 0.79
USP8P40818 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.97■□□□□ 0.79
USP8P40818 AC066615.1-201ENST00000640911 628 ntBASIC19.97■□□□□ 0.79
USP8P40818 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP8P40818 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.97■□□□□ 0.79
USP8P40818 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP8P40818 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.96■□□□□ 0.79
USP8P40818 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.96■□□□□ 0.79
USP8P40818 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 AC099343.3-201ENST00000605834 2503 ntBASIC19.96■□□□□ 0.79
USP8P40818 AL596275.1-201ENST00000423464 877 ntBASIC19.96■□□□□ 0.79
USP8P40818 SLC25A1P2-201ENST00000430693 912 ntBASIC19.96■□□□□ 0.79
USP8P40818 CCR12P-201ENST00000446203 998 ntBASIC19.96■□□□□ 0.79
USP8P40818 C2orf69P3-201ENST00000565542 1120 ntBASIC19.96■□□□□ 0.79
USP8P40818 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 AC073592.3-201ENST00000625118 1834 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms