Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT2P35908 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT2P35908 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT2P35908 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
KRT2P35908 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT2P35908 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
KRT2P35908 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT2P35908 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT2P35908 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT2P35908 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.03■□□□□ 0.96
KRT2P35908 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT2P35908 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 AC117947.1-201ENST00000427448 529 ntBASIC21.03■□□□□ 0.96
KRT2P35908 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 YBX1P2-201ENST00000489612 999 ntBASIC21.03■□□□□ 0.96
KRT2P35908 AC034232.1-201ENST00000506026 1064 ntBASIC21.03■□□□□ 0.96
KRT2P35908 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
KRT2P35908 AC011558.1-201ENST00000623459 338 ntBASIC21.03■□□□□ 0.96
KRT2P35908 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT2P35908 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
KRT2P35908 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT2P35908 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT2P35908 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT2P35908 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT2P35908 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KRT2P35908 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT2P35908 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT2P35908 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT2P35908 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT2P35908 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT2P35908 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT2P35908 LINC01126-201ENST00000623515 1646 ntBASIC21.02■□□□□ 0.96
KRT2P35908 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT2P35908 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 AL024508.2-201ENST00000607749 1894 ntBASIC21.02■□□□□ 0.96
KRT2P35908 PHGDH-209ENST00000641074 1780 ntBASIC21.02■□□□□ 0.96
KRT2P35908 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT2P35908 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT2P35908 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KRT2P35908 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT2P35908 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KRT2P35908 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KRT2P35908 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KRT2P35908 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT2P35908 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT2P35908 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KRT2P35908 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.01■□□□□ 0.95
KRT2P35908 AC006011.2-201ENST00000621313 1158 ntBASIC21.01■□□□□ 0.95
KRT2P35908 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KRT2P35908 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT2P35908 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.01■□□□□ 0.95
KRT2P35908 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT2P35908 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KRT2P35908 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT2P35908 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT2P35908 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms