Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
SHC1P29353 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHC1P29353 LIN28AP1-201ENST00000429574 405 ntBASIC16.83■□□□□ 0.28
SHC1P29353 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.83■□□□□ 0.28
SHC1P29353 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.83■□□□□ 0.28
SHC1P29353 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC1P29353 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SHC1P29353 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.83■□□□□ 0.28
SHC1P29353 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 AC067852.2-201ENST00000590513 2313 ntBASIC16.82■□□□□ 0.28
SHC1P29353 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHC1P29353 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SHC1P29353 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SHC1P29353 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC1P29353 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC1P29353 ATP5G1P1-201ENST00000448724 379 ntBASIC16.82■□□□□ 0.28
SHC1P29353 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC1P29353 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SHC1P29353 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 WWOX-216ENST00000569818 525 ntBASIC16.82■□□□□ 0.28
SHC1P29353 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.82■□□□□ 0.28
SHC1P29353 AC141257.4-201ENST00000634557 245 ntBASIC16.82■□□□□ 0.28
SHC1P29353 AC136944.6-201ENST00000634818 245 ntBASIC16.82■□□□□ 0.28
SHC1P29353 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC1P29353 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC1P29353 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC1P29353 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC1P29353 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 AL499627.1-201ENST00000569373 2188 ntBASIC16.81■□□□□ 0.28
SHC1P29353 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
SHC1P29353 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 MIR564-202ENST00000385049 94 ntBASIC16.81■□□□□ 0.28
SHC1P29353 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SHC1P29353 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC1P29353 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC1P29353 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC1P29353 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHC1P29353 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.8■□□□□ 0.28
SHC1P29353 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC1P29353 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms