Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MMP11P24347 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MMP11P24347 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP11P24347 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP11P24347 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP11P24347 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.42■□□□□ 0.38
MMP11P24347 AC104390.1-201ENST00000555663 520 ntBASIC17.42■□□□□ 0.38
MMP11P24347 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
MMP11P24347 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.42■□□□□ 0.38
MMP11P24347 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP11P24347 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP11P24347 BICD1-207ENST00000551848 1962 ntBASIC17.42■□□□□ 0.38
MMP11P24347 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP11P24347 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP11P24347 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP11P24347 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 AC034236.2-201ENST00000606662 1610 ntBASIC17.41■□□□□ 0.38
MMP11P24347 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.41■□□□□ 0.38
MMP11P24347 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP11P24347 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
MMP11P24347 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP11P24347 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.41■□□□□ 0.38
MMP11P24347 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MMP11P24347 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP11P24347 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MMP11P24347 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 ANO7L1-203ENST00000602586 1720 ntBASIC17.41■□□□□ 0.38
MMP11P24347 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP11P24347 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP11P24347 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP11P24347 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP11P24347 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MMP11P24347 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
MMP11P24347 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP11P24347 HLA-F-220ENST00000434407 884 ntBASIC17.4■□□□□ 0.38
MMP11P24347 HCG4P8-203ENST00000443049 980 ntBASIC17.4■□□□□ 0.38
MMP11P24347 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP11P24347 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP11P24347 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP11P24347 AC079602.3-201ENST00000623931 403 ntBASIC17.4■□□□□ 0.38
MMP11P24347 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP11P24347 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP11P24347 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms