Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDH3P22223 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH3P22223 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDH3P22223 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH3P22223 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH3P22223 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 AC034232.1-201ENST00000506026 1064 ntBASIC17.97■□□□□ 0.47
CDH3P22223 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH3P22223 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH3P22223 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 MYC-208ENST00000641036 567 ntBASIC17.97■□□□□ 0.47
CDH3P22223 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 AL390961.4-201ENST00000623958 2535 ntBASIC17.97■□□□□ 0.47
CDH3P22223 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH3P22223 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH3P22223 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDH3P22223 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 STARP1-201ENST00000397973 869 ntBASIC17.96■□□□□ 0.47
CDH3P22223 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH3P22223 KRT18P38-201ENST00000449496 1282 ntBASIC17.96■□□□□ 0.47
CDH3P22223 AL671277.2-201ENST00000458060 996 ntBASIC17.96■□□□□ 0.47
CDH3P22223 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH3P22223 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH3P22223 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH3P22223 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH3P22223 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH3P22223 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH3P22223 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH3P22223 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CDH3P22223 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 AL031133.1-201ENST00000406807 723 ntBASIC17.95■□□□□ 0.46
CDH3P22223 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 KRT18P23-201ENST00000435622 1283 ntBASIC17.95■□□□□ 0.46
CDH3P22223 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 AC112907.2-201ENST00000448639 330 ntBASIC17.95■□□□□ 0.46
CDH3P22223 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH3P22223 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CDH3P22223 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH3P22223 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH3P22223 AC012313.1-201ENST00000593393 3059 ntBASIC17.95■□□□□ 0.46
CDH3P22223 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH3P22223 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH3P22223 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH3P22223 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH3P22223 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms