Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 AC243591.1-201ENST00000452967 1364 ntBASIC20.38■□□□□ 0.85
SMPD1P17405 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.38■□□□□ 0.85
SMPD1P17405 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.38■□□□□ 0.85
SMPD1P17405 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.38■□□□□ 0.85
SMPD1P17405 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.38■□□□□ 0.85
SMPD1P17405 AL138831.2-201ENST00000606564 490 ntBASIC20.38■□□□□ 0.85
SMPD1P17405 AP001269.4-201ENST00000609611 512 ntBASIC20.38■□□□□ 0.85
SMPD1P17405 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.38■□□□□ 0.85
SMPD1P17405 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD1P17405 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD1P17405 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD1P17405 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 PMS2P1-201ENST00000431037 1228 ntBASIC20.37■□□□□ 0.85
SMPD1P17405 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.37■□□□□ 0.85
SMPD1P17405 AC009533.2-201ENST00000543664 586 ntBASIC20.37■□□□□ 0.85
SMPD1P17405 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.37■□□□□ 0.85
SMPD1P17405 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.37■□□□□ 0.85
SMPD1P17405 MTDHP3-201ENST00000594186 672 ntBASIC20.37■□□□□ 0.85
SMPD1P17405 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.37■□□□□ 0.85
SMPD1P17405 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMPD1P17405 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD1P17405 INTS4P1-201ENST00000438455 1935 ntBASIC20.37■□□□□ 0.85
SMPD1P17405 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD1P17405 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD1P17405 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD1P17405 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.36■□□□□ 0.85
SMPD1P17405 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD1P17405 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD1P17405 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD1P17405 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD1P17405 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 MIR7706-201ENST00000613747 67 ntBASIC20.36■□□□□ 0.85
SMPD1P17405 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.36■□□□□ 0.85
SMPD1P17405 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.36■□□□□ 0.85
SMPD1P17405 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD1P17405 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD1P17405 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.35■□□□□ 0.85
SMPD1P17405 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.35■□□□□ 0.85
SMPD1P17405 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMPD1P17405 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.35■□□□□ 0.85
SMPD1P17405 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.35■□□□□ 0.85
SMPD1P17405 RBM17P3-201ENST00000417687 1192 ntBASIC20.35■□□□□ 0.85
SMPD1P17405 HNRNPDP1-201ENST00000439535 754 ntBASIC20.35■□□□□ 0.85
SMPD1P17405 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.35■□□□□ 0.85
SMPD1P17405 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMPD1P17405 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SMPD1P17405 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.35■□□□□ 0.85
SMPD1P17405 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 AC125634.1-201ENST00000438758 1403 ntBASIC20.35■□□□□ 0.85
SMPD1P17405 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms