Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST1H1DP16402 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST1H1DP16402 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HIST1H1DP16402 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIST1H1DP16402 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST1H1DP16402 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST1H1DP16402 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HIST1H1DP16402 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.6■□□□□ 0.09
HIST1H1DP16402 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST1H1DP16402 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HIST1H1DP16402 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 PHGDH-209ENST00000641074 1780 ntBASIC15.59■□□□□ 0.09
HIST1H1DP16402 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 AC026271.3-201ENST00000571884 352 ntBASIC15.59■□□□□ 0.09
HIST1H1DP16402 AC124016.1-201ENST00000609552 612 ntBASIC15.59■□□□□ 0.09
HIST1H1DP16402 AC011298.2-201ENST00000617989 482 ntBASIC15.59■□□□□ 0.09
HIST1H1DP16402 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.59■□□□□ 0.09
HIST1H1DP16402 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST1H1DP16402 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST1H1DP16402 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIST1H1DP16402 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.58■□□□□ 0.09
HIST1H1DP16402 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 MIR564-202ENST00000385049 94 ntBASIC15.58■□□□□ 0.08
HIST1H1DP16402 AC133681.1-201ENST00000465482 601 ntBASIC15.58■□□□□ 0.08
HIST1H1DP16402 RPS2P4-201ENST00000476944 856 ntBASIC15.58■□□□□ 0.08
HIST1H1DP16402 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 AC110285.5-201ENST00000611501 352 ntBASIC15.58■□□□□ 0.08
HIST1H1DP16402 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 PKD1P1-201ENST00000458669 6805 ntBASIC15.58■□□□□ 0.08
HIST1H1DP16402 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HIST1H1DP16402 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H1DP16402 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 AL645608.8-201ENST00000606034 2086 ntBASIC15.57■□□□□ 0.08
HIST1H1DP16402 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms