Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CFTRP13569 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CFTRP13569 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
CFTRP13569 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CFTRP13569 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CFTRP13569 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CFTRP13569 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CFTRP13569 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC31.27■■■□□ 2.6
CFTRP13569 AC112698.1-201ENST00000510299 916 ntBASIC31.27■■■□□ 2.6
CFTRP13569 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CFTRP13569 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC31.27■■■□□ 2.6
CFTRP13569 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC31.27■■■□□ 2.6
CFTRP13569 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC31.27■■■□□ 2.6
CFTRP13569 AC006557.2-201ENST00000592985 1240 ntBASIC31.27■■■□□ 2.6
CFTRP13569 AL596442.2-201ENST00000610240 980 ntBASIC31.27■■■□□ 2.6
CFTRP13569 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC31.27■■■□□ 2.6
CFTRP13569 PGM5P2-202ENST00000637225 1043 ntBASIC31.27■■■□□ 2.6
CFTRP13569 AL022326.1-202ENST00000641533 845 ntBASIC31.27■■■□□ 2.6
CFTRP13569 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CFTRP13569 AL137060.1-201ENST00000618151 2648 ntBASIC31.27■■■□□ 2.6
CFTRP13569 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CFTRP13569 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
CFTRP13569 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CFTRP13569 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC31.27■■■□□ 2.6
CFTRP13569 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CFTRP13569 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC31.27■■■□□ 2.6
CFTRP13569 BX005266.1-201ENST00000473402 457 ntBASIC31.27■■■□□ 2.6
CFTRP13569 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC31.27■■■□□ 2.6
CFTRP13569 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
CFTRP13569 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC31.27■■■□□ 2.6
CFTRP13569 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC31.27■■■□□ 2.6
CFTRP13569 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
CFTRP13569 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
CFTRP13569 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CFTRP13569 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.26■■■□□ 2.59
CFTRP13569 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CFTRP13569 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC31.26■■■□□ 2.59
CFTRP13569 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC31.26■■■□□ 2.59
CFTRP13569 AC007967.3-201ENST00000434308 558 ntBASIC31.26■■■□□ 2.59
CFTRP13569 AC005829.1-201ENST00000570002 483 ntBASIC31.26■■■□□ 2.59
CFTRP13569 MIR4469-201ENST00000583919 79 ntBASIC31.26■■■□□ 2.59
CFTRP13569 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC31.25■■■□□ 2.59
CFTRP13569 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CFTRP13569 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC31.25■■■□□ 2.59
CFTRP13569 CFL1-202ENST00000524553 860 ntTSL 2 BASIC31.25■■■□□ 2.59
CFTRP13569 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC31.25■■■□□ 2.59
CFTRP13569 LINC01126-201ENST00000623515 1646 ntBASIC31.25■■■□□ 2.59
CFTRP13569 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CFTRP13569 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CFTRP13569 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CFTRP13569 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC31.24■■■□□ 2.59
CFTRP13569 POLI-202ENST00000406285 2030 ntTSL 2 BASIC31.24■■■□□ 2.59
CFTRP13569 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC31.24■■■□□ 2.59
CFTRP13569 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC31.24■■■□□ 2.59
CFTRP13569 PON3-203ENST00000427422 894 ntTSL 3 BASIC31.24■■■□□ 2.59
CFTRP13569 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
CFTRP13569 AC136632.2-201ENST00000512891 861 ntBASIC31.24■■■□□ 2.59
CFTRP13569 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CFTRP13569 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
CFTRP13569 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC31.24■■■□□ 2.59
CFTRP13569 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFTRP13569 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
CFTRP13569 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 CALY-203ENST00000368558 825 ntTSL 5 BASIC31.23■■■□□ 2.59
CFTRP13569 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 CD9-202ENST00000382515 1229 ntTSL 5 BASIC31.23■■■□□ 2.59
CFTRP13569 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CFTRP13569 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC31.23■■■□□ 2.59
CFTRP13569 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CFTRP13569 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC31.23■■■□□ 2.59
CFTRP13569 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CFTRP13569 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CFTRP13569 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC31.22■■■□□ 2.59
CFTRP13569 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
CFTRP13569 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC31.22■■■□□ 2.59
CFTRP13569 HTR5BP-201ENST00000430851 1154 ntBASIC31.22■■■□□ 2.59
CFTRP13569 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CFTRP13569 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC31.22■■■□□ 2.59
CFTRP13569 AC027612.4-201ENST00000605371 583 ntBASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms