Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 AC093677.2-201ENST00000600169 1863 ntBASIC19.35■□□□□ 0.69
KRT3P12035 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT3P12035 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 ECEL1P3-201ENST00000427961 737 ntBASIC19.34■□□□□ 0.69
KRT3P12035 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT3P12035 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT3P12035 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT3P12035 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT3P12035 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT3P12035 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 MIR3180-4-201ENST00000582223 153 ntBASIC19.34■□□□□ 0.69
KRT3P12035 AC024243.1-201ENST00000609234 778 ntBASIC19.34■□□□□ 0.69
KRT3P12035 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
KRT3P12035 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 GMCL1P1-201ENST00000463439 1581 ntBASIC19.34■□□□□ 0.69
KRT3P12035 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT3P12035 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KRT3P12035 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KRT3P12035 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
KRT3P12035 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT3P12035 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT3P12035 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT3P12035 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.33■□□□□ 0.69
KRT3P12035 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT3P12035 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
KRT3P12035 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 SLC25A3P1-201ENST00000443844 931 ntBASIC19.33■□□□□ 0.68
KRT3P12035 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.33■□□□□ 0.68
KRT3P12035 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT3P12035 AC009065.1-201ENST00000564055 1225 ntBASIC19.33■□□□□ 0.68
KRT3P12035 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT3P12035 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
KRT3P12035 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KRT3P12035 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
KRT3P12035 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT3P12035 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
KRT3P12035 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT3P12035 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT3P12035 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 SEC1P-202ENST00000473944 940 ntBASIC19.32■□□□□ 0.68
KRT3P12035 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 AC010240.3-201ENST00000607688 395 ntBASIC19.32■□□□□ 0.68
KRT3P12035 AC012306.2-201ENST00000609350 630 ntBASIC19.32■□□□□ 0.68
KRT3P12035 AC141257.4-201ENST00000634557 245 ntBASIC19.32■□□□□ 0.68
KRT3P12035 AC136944.6-201ENST00000634818 245 ntBASIC19.32■□□□□ 0.68
KRT3P12035 AC097493.4-201ENST00000641197 219 ntBASIC19.32■□□□□ 0.68
KRT3P12035 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms