Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TOP2AP11388 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC32■■■□□ 2.71
TOP2AP11388 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
TOP2AP11388 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC32■■■□□ 2.71
TOP2AP11388 AC112698.1-201ENST00000510299 916 ntBASIC32■■■□□ 2.71
TOP2AP11388 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TOP2AP11388 COX5A-204ENST00000567270 579 ntTSL 3 BASIC32■■■□□ 2.71
TOP2AP11388 RNF151-202ENST00000569210 853 ntTSL 2 BASIC32■■■□□ 2.71
TOP2AP11388 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC32■■■□□ 2.71
TOP2AP11388 AC055717.3-201ENST00000622967 595 ntBASIC32■■■□□ 2.71
TOP2AP11388 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TOP2AP11388 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TOP2AP11388 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TOP2AP11388 USP39-202ENST00000409025 1946 ntTSL 5 BASIC31.99■■■□□ 2.71
TOP2AP11388 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
TOP2AP11388 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC31.99■■■□□ 2.71
TOP2AP11388 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC31.99■■■□□ 2.71
TOP2AP11388 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC31.99■■■□□ 2.71
TOP2AP11388 AC005104.2-201ENST00000427818 678 ntBASIC31.99■■■□□ 2.71
TOP2AP11388 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
TOP2AP11388 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
TOP2AP11388 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC31.98■■■□□ 2.71
TOP2AP11388 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
TOP2AP11388 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
TOP2AP11388 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TOP2AP11388 AP002414.3-201ENST00000589352 1468 ntBASIC31.98■■■□□ 2.71
TOP2AP11388 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TOP2AP11388 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 RPS2P28-201ENST00000314255 741 ntBASIC31.97■■■□□ 2.71
TOP2AP11388 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
TOP2AP11388 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
TOP2AP11388 KRT18P27-201ENST00000427733 1299 ntBASIC31.97■■■□□ 2.71
TOP2AP11388 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC31.97■■■□□ 2.71
TOP2AP11388 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC31.97■■■□□ 2.71
TOP2AP11388 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC31.97■■■□□ 2.71
TOP2AP11388 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC31.97■■■□□ 2.71
TOP2AP11388 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TOP2AP11388 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
TOP2AP11388 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC31.97■■■□□ 2.71
TOP2AP11388 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC31.97■■■□□ 2.71
TOP2AP11388 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC31.97■■■□□ 2.71
TOP2AP11388 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 YBX2P1-201ENST00000394192 760 ntBASIC31.96■■■□□ 2.71
TOP2AP11388 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 RPSAP43-201ENST00000402237 625 ntBASIC31.96■■■□□ 2.71
TOP2AP11388 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 MTDHP4-201ENST00000600287 670 ntBASIC31.96■■■□□ 2.71
TOP2AP11388 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC31.96■■■□□ 2.71
TOP2AP11388 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
TOP2AP11388 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
TOP2AP11388 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TOP2AP11388 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
TOP2AP11388 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TOP2AP11388 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TOP2AP11388 UPF3AP3-201ENST00000420996 769 ntBASIC31.95■■■□□ 2.71
TOP2AP11388 LAGE3P1-201ENST00000425356 484 ntBASIC31.95■■■□□ 2.71
TOP2AP11388 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC31.95■■■□□ 2.71
TOP2AP11388 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TOP2AP11388 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
TOP2AP11388 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
TOP2AP11388 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
TOP2AP11388 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TOP2AP11388 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TOP2AP11388 MIR940-201ENST00000401276 94 ntBASIC31.95■■■□□ 2.7
TOP2AP11388 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC31.95■■■□□ 2.7
TOP2AP11388 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC31.95■■■□□ 2.7
TOP2AP11388 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
TOP2AP11388 AC073592.4-201ENST00000623827 446 ntBASIC31.95■■■□□ 2.7
TOP2AP11388 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
TOP2AP11388 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
TOP2AP11388 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TOP2AP11388 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
TOP2AP11388 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TOP2AP11388 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TOP2AP11388 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7
TOP2AP11388 CENPM-204ENST00000402420 688 ntTSL 5 BASIC31.94■■■□□ 2.7
TOP2AP11388 AC007967.3-201ENST00000434308 558 ntBASIC31.94■■■□□ 2.7
TOP2AP11388 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC31.94■■■□□ 2.7
TOP2AP11388 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC31.94■■■□□ 2.7
TOP2AP11388 HOTTIP_1.1-201ENST00000620415 57 ntBASIC31.94■■■□□ 2.7
TOP2AP11388 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TOP2AP11388 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC31.93■■■□□ 2.7
TOP2AP11388 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TOP2AP11388 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
TOP2AP11388 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms