Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 AC135776.1-201ENST00000319817 2481 ntBASIC18.41■□□□□ 0.54
APOA4P06727 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
APOA4P06727 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
APOA4P06727 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.41■□□□□ 0.54
APOA4P06727 AC007663.1-201ENST00000438948 1240 ntBASIC18.41■□□□□ 0.54
APOA4P06727 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
APOA4P06727 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
APOA4P06727 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
APOA4P06727 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOA4P06727 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 OR6D1P-202ENST00000641007 5290 ntBASIC18.4■□□□□ 0.54
APOA4P06727 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.4■□□□□ 0.54
APOA4P06727 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 AC087499.1-201ENST00000418141 1075 ntBASIC18.4■□□□□ 0.54
APOA4P06727 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.4■□□□□ 0.54
APOA4P06727 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 AC073912.3-201ENST00000624414 853 ntBASIC18.4■□□□□ 0.54
APOA4P06727 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 LINC01568-207ENST00000641790 1380 ntBASIC18.4■□□□□ 0.54
APOA4P06727 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.4■□□□□ 0.54
APOA4P06727 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOA4P06727 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.4■□□□□ 0.54
APOA4P06727 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
APOA4P06727 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
APOA4P06727 AC093677.2-201ENST00000600169 1863 ntBASIC18.39■□□□□ 0.54
APOA4P06727 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.39■□□□□ 0.54
APOA4P06727 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
APOA4P06727 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
APOA4P06727 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 AC008556.1-201ENST00000610908 2040 ntBASIC18.39■□□□□ 0.53
APOA4P06727 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.39■□□□□ 0.53
APOA4P06727 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.39■□□□□ 0.53
APOA4P06727 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
APOA4P06727 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.39■□□□□ 0.53
APOA4P06727 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.39■□□□□ 0.53
APOA4P06727 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.39■□□□□ 0.53
APOA4P06727 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.39■□□□□ 0.53
APOA4P06727 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 AC020916.1-201ENST00000587762 1774 ntBASIC18.39■□□□□ 0.53
APOA4P06727 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.39■□□□□ 0.53
APOA4P06727 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms