Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND1P03886 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.34■□□□□ 0.37
MT-ND1P03886 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND1P03886 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MT-ND1P03886 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 AC108860.2-201ENST00000562760 2183 ntBASIC17.34■□□□□ 0.37
MT-ND1P03886 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 AC099343.3-201ENST00000605834 2503 ntBASIC17.34■□□□□ 0.37
MT-ND1P03886 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-ND1P03886 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-ND1P03886 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.33■□□□□ 0.37
MT-ND1P03886 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.33■□□□□ 0.37
MT-ND1P03886 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.33■□□□□ 0.37
MT-ND1P03886 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MT-ND1P03886 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.33■□□□□ 0.37
MT-ND1P03886 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.33■□□□□ 0.37
MT-ND1P03886 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 KRT8P45-201ENST00000414328 1447 ntBASIC17.33■□□□□ 0.36
MT-ND1P03886 AC112777.1-201ENST00000540175 1423 ntBASIC17.33■□□□□ 0.36
MT-ND1P03886 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 AC084018.2-201ENST00000613093 2607 ntBASIC17.33■□□□□ 0.36
MT-ND1P03886 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
MT-ND1P03886 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-ND1P03886 MYC-208ENST00000641036 567 ntBASIC17.33■□□□□ 0.36
MT-ND1P03886 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
MT-ND1P03886 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MT-ND1P03886 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
MT-ND1P03886 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND1P03886 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND1P03886 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MT-ND1P03886 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND1P03886 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND1P03886 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.32■□□□□ 0.36
MT-ND1P03886 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND1P03886 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND1P03886 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
MT-ND1P03886 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MT-ND1P03886 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-ND1P03886 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-ND1P03886 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-ND1P03886 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-ND1P03886 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MT-ND1P03886 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-ND1P03886 KRT18P6-201ENST00000555540 1265 ntBASIC17.31■□□□□ 0.36
MT-ND1P03886 AC233263.1-201ENST00000578059 224 ntBASIC17.31■□□□□ 0.36
MT-ND1P03886 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND1P03886 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND1P03886 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 KRT8P11-201ENST00000409686 1436 ntBASIC17.3■□□□□ 0.36
MT-ND1P03886 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms