Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SNX4O95219 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX4O95219 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
SNX4O95219 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX4O95219 RN7SL850P-201ENST00000579959 291 ntBASIC17.24■□□□□ 0.35
SNX4O95219 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNX4O95219 AL138966.2-201ENST00000621997 464 ntBASIC17.24■□□□□ 0.35
SNX4O95219 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 AL031598.1-201ENST00000561511 1773 ntBASIC17.24■□□□□ 0.35
SNX4O95219 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX4O95219 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNX4O95219 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX4O95219 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.24■□□□□ 0.35
SNX4O95219 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX4O95219 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX4O95219 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.23■□□□□ 0.35
SNX4O95219 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SNX4O95219 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX4O95219 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX4O95219 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX4O95219 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX4O95219 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX4O95219 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SNX4O95219 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.22■□□□□ 0.35
SNX4O95219 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX4O95219 AC139713.2-201ENST00000641328 2723 ntBASIC17.22■□□□□ 0.35
SNX4O95219 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SNX4O95219 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.22■□□□□ 0.35
SNX4O95219 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 KRT18P57-201ENST00000443599 1254 ntBASIC17.22■□□□□ 0.35
SNX4O95219 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX4O95219 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX4O95219 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX4O95219 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SNX4O95219 AL031432.5-201ENST00000641059 760 ntBASIC17.22■□□□□ 0.35
SNX4O95219 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX4O95219 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms