Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.32■□□□□ 0.68
RTN3O95197 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN3O95197 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RTN3O95197 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.31■□□□□ 0.68
RTN3O95197 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.31■□□□□ 0.68
RTN3O95197 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
RTN3O95197 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 BX276092.5-203ENST00000456199 560 ntBASIC19.31■□□□□ 0.68
RTN3O95197 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN3O95197 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN3O95197 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.31■□□□□ 0.68
RTN3O95197 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.31■□□□□ 0.68
RTN3O95197 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTN3O95197 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN3O95197 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN3O95197 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTN3O95197 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 AC009102.3-201ENST00000623118 1491 ntBASIC19.3■□□□□ 0.68
RTN3O95197 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 AP003733.1-201ENST00000491725 852 ntBASIC19.3■□□□□ 0.68
RTN3O95197 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.3■□□□□ 0.68
RTN3O95197 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN3O95197 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN3O95197 AC007613.1-201ENST00000572811 2597 ntBASIC19.3■□□□□ 0.68
RTN3O95197 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 KRT89P-201ENST00000620027 1478 ntBASIC19.29■□□□□ 0.68
RTN3O95197 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN3O95197 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN3O95197 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN3O95197 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN3O95197 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 KRT8P26-201ENST00000534154 1276 ntBASIC19.29■□□□□ 0.68
RTN3O95197 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN3O95197 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.29■□□□□ 0.68
RTN3O95197 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN3O95197 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTN3O95197 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RTN3O95197 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN3O95197 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTN3O95197 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN3O95197 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN3O95197 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN3O95197 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN3O95197 TSPY22P-201ENST00000427496 604 ntBASIC19.28■□□□□ 0.68
RTN3O95197 ATP5G2P1-201ENST00000433580 426 ntBASIC19.28■□□□□ 0.68
RTN3O95197 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.28■□□□□ 0.68
RTN3O95197 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.28■□□□□ 0.68
RTN3O95197 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN3O95197 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.28■□□□□ 0.68
RTN3O95197 AC008687.5-201ENST00000593746 558 ntBASIC19.28■□□□□ 0.68
RTN3O95197 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN3O95197 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN3O95197 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN3O95197 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN3O95197 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN3O95197 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms