Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
CDRT1O95170 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDRT1O95170 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.39■□□□□ 0.21
CDRT1O95170 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDRT1O95170 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 AC022211.2-201ENST00000585075 2527 ntBASIC16.38■□□□□ 0.21
CDRT1O95170 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 MIR935-201ENST00000401179 91 ntBASIC16.38■□□□□ 0.21
CDRT1O95170 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.38■□□□□ 0.21
CDRT1O95170 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 SOX15-203ENST00000570788 1093 ntBASIC16.38■□□□□ 0.21
CDRT1O95170 AC068587.9-201ENST00000641814 219 ntBASIC16.38■□□□□ 0.21
CDRT1O95170 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.38■□□□□ 0.21
CDRT1O95170 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT1O95170 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDRT1O95170 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT1O95170 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.37■□□□□ 0.21
CDRT1O95170 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.37■□□□□ 0.21
CDRT1O95170 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 AL138781.1-201ENST00000566567 1274 ntBASIC16.37■□□□□ 0.21
CDRT1O95170 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CDRT1O95170 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.37■□□□□ 0.21
CDRT1O95170 AC083880.1-201ENST00000608266 535 ntBASIC16.37■□□□□ 0.21
CDRT1O95170 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 NKILA-202ENST00000614771 2598 ntBASIC16.37■□□□□ 0.21
CDRT1O95170 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CDRT1O95170 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDRT1O95170 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT1O95170 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT1O95170 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 AC008556.1-201ENST00000610908 2040 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms