Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPXO76031 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPXO76031 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPXO76031 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CLPXO76031 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPXO76031 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CLPXO76031 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPXO76031 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPXO76031 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPXO76031 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.67■□□□□ 0.26
CLPXO76031 AC018553.1-201ENST00000616682 1458 ntBASIC16.67■□□□□ 0.26
CLPXO76031 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLPXO76031 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLPXO76031 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
CLPXO76031 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 AL355472.2-201ENST00000422958 438 ntBASIC16.67■□□□□ 0.26
CLPXO76031 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.67■□□□□ 0.26
CLPXO76031 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CLPXO76031 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLPXO76031 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPXO76031 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPXO76031 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLPXO76031 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLPXO76031 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 FLJ13224-201ENST00000313737 1514 ntBASIC16.66■□□□□ 0.26
CLPXO76031 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.66■□□□□ 0.26
CLPXO76031 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLPXO76031 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLPXO76031 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLPXO76031 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 LSM12P1-201ENST00000411836 588 ntBASIC16.66■□□□□ 0.26
CLPXO76031 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CLPXO76031 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLPXO76031 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CLPXO76031 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLPXO76031 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLPXO76031 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLPXO76031 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.65■□□□□ 0.26
CLPXO76031 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLPXO76031 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms